Evidence of positive selection towards zebuine haplotypes in the BoLA region of Brangus cattle

GOSZCZYNSKI D.E.; CORBI BOTTO C M; MORALES DURAND H. F.; ROGBERG MUÑOZ A.; MUNILLA S.; PERAL GARCIA P.; CANTET R. J. C.; GIOVAMBATTISTA G.

ANIMAL

CAMBRIDGE UNIV PRESS

Lugar: Cambridge; Año: 2018

1751-7311

The Brangus breed was developed to combine the superior characteristics of both of its founder breeds, Angus and Brahman. It combines the high adaptability to tropical and subtropical environments, disease resistance, and overall hardiness of Zebu cattle with the reproductive potential and carcass quality of Angus. It is known that the major histocompatibility complex (MHC, also known as bovine leucocyte antigen: BoLA), located on chromosome 23, encodes several genes involved in the adaptive immune response and may be responsible for adaptation to harsh environments. The objective of this work was to evaluate whether the local breed ancestry percentages in the BoLA locus of a Brangus population diverged from the estimated genome-wide proportions and to identify signatures of positive selection in this genomic region. For this, 167 animals (100 Brangus, 45 Angus and 22 Brahman) were genotyped using a highdensitysingle nucleotide polymorphism (SNP) array. The local ancestry analysisshowed that more than half of the haplotypes (55.0%) shared a Brahman origin. This value was significantly different from the global genome-wide proportion estimated by cluster analysis (34.7% Brahman), and the proportion expected by pedigree (37.5% Brahman). The analysis of selection signatures by genetic differentiation (FST) and extended haplotype homozygosity-based methods (iHS and Rsb) revealed ten and seven candidate regions, respectively. The analysis of the genes located within these candidate regions showed mainly genes involved in immune response-related pathway, while other genes and pathways were also observed (cell surface signaling pathways, membrane proteins and ion binding-proteins). Our results suggest that the BoLA region of Brangus cattle may have been enriched with Brahman haplotypes as a consequence of selection processes to promote adaptation to subtropical environments.