INVESTIGADORES
PALOPOLI Nicolas
artículos
KUMAR, MANJEET; MICHAEL, SUSHAMA; ALVARADO-VALVERDE, JESÚS; ZEKE, ANDRÁS; LAZAR, TAMAS; GLAVINA, JULIANA; NAGY-KANTA, ESZTER; DONAGH, JUAN MAC; KALMAN, ZSOFIA E; PASCARELLI, STEFANO; PALOPOLI, NICOLAS; DOBSON, LÁSZLÓ; SUAREZ, CARMEN FLORENCIA; VAN ROEY, KIM; KRYSTKOWIAK, IZABELLA; GRIFFIN, JUAN ESTEBAN; NAGPAL, ANURAG; BHARDWAJ, RAJESH; DIELLA, FRANCESCA; MÉSZÁROS, BÁLINT; DEAN, KELLIE; DAVEY, NORMAN E; PANCSA, RITA; CHEMES, LUCÍA B; GIBSON, TOBY J
ELM - the Eukaryotic Linear Motif resource - 2024 update
NUCLEIC ACIDS RESEARCH; Lugar: Oxford; Año: 2024 vol. 52 p. 442 - 455
ESCOBEDO, NAHUEL; SALDAÑO, TADEO; MAC DONAGH, JUAN; SAWICKI, LUCIANA RODRIGUEZ; PALOPOLI, NICOLAS; ALBERTI, SEBASTIAN FERNANDEZ; FORNASARI, MARIA SILVINA; PARISI, GUSTAVO
Revealing Missing Protein–Ligand Interactions Using AlphaFold Predictions
JOURNAL OF MOLECULAR BIOLOGY; Año: 2024 vol. 436
MESZAROS, BALINT ; HATOS, ANDRÁS; PALOPOLI, NICOLAS; QUAGLIA, FEDERICA; SALLADINI, EDOARDO; VAN ROEY, KIM; VRANKEN, WIM; TOMPA, PETER; TOSATTO, SILVIO C E; DAVEY, NORMAN E
Minimum information guidelines for experiments structurally characterizing intrinsically disordered protein regions
Nature Methods; Año: 2023 vol. 20 p. 1291 - 1303
ORMAZABAL, A; CARLETTI, M; SALDAÑO, TADEO; GONZALEZ BUITRON, M; MARCHETTI, JULIA; PALOPOLI, NICOLAS; BATEMAN, ALEX
Expanding the repertoire of human tandem repeat RNA-binding proteins
PLOS ONE; Lugar: San Francisco; Año: 2023 vol. 18
ESCOBEDO, NAHUEL; MONZON, ALEXANDER M.; FORNASARI, MARIA SILVINA; PALOPOLI, NICOLAS; PARISI, GUSTAVO
Combining Protein Conformational Diversity and Phylogenetic Information Using CoDNaS and CoDNaS-Q
Current Protocols; Año: 2023 vol. 3
VELEZ RUEDA, ANA JULIA; BURGARELLI, FRANCO; PALOPOLI, NICOLAS; PARISI, GUSTAVO
CaviDB: a database of cavities and their features in the structural and conformational space of proteins
Database; Año: 2023 vol. 2023
SALDAÑO, TADEO; ESCOBEDO, NAHUEL; MARCHETTI, JULIA; ZEA, DIEGO JAVIER; MAC DONAGH, JUAN; VELEZ RUEDA, ANA JULIA; GONIK, EDUARDO; GARCÍA MELANI, AGUSTINA; NOVOMISKY NECHCOFF, JULIETA; SALAS, MARTÍN N; PETERS, TOMÁS; DEMITROFF, NICOLÁS; FERNANDEZ ALBERTI, SEBASTIAN; PALOPOLI, NICOLAS; FORNASARI, MARIA SILVINA; PARISI, GUSTAVO
Impact of protein conformational diversity on AlphaFold predictions
BIOINFORMATICS (OXFORD, ENGLAND); Año: 2022
VELEZ RUEDA, ANA JULIA; BENÍTEZ, GUILLERMO IGNACIO; SOMMESE, LEANDRO MATÍAS; ARDANAZ, SEBASTIÁN M.; BORUCKI, ESTEFANÍA L.; PALOPOLI, NICOLAS; IGLESIAS, LUIS E.; PARISI, GUSTAVO
Structural and evolutionary analysis unveil functional adaptations in the promiscuous behavior of serum albumins
BIOCHIMIE; Año: 2022 vol. 197 p. 113 - 120
QUAGLIA, FEDERICA; MÉSZÁROS, BÁLINT; SALLADINI, EDOARDO; HATOS, ANDRÁS; PANCSA, RITA; CHEMES, LUCÍA B; PAJKOS, MÁTYÁS; LAZAR, TAMAS; PEÑA-DÍAZ, SAMUEL; SANTOS, JAIME; ÁCS, VERONIKA; FARAHI, NAZANIN; FICHÓ, ERZSÉBET; ASPROMONTE, MARIA CRISTINA; BASSOT, CLAUDIO; CHASAPI, ANASTASIA; DAVEY, NORMAN E; DAVIDOVIC, RADOSLAV; DOBSON, LASZLO; ELOFSSON, ARNE; ERDOS, GÁBOR; GAUDET, PASCALE; GIGLIO, MICHELLE; GLAVINA, JULIANA; ISERTE, JAVIER; IGLESIAS, VALENTÍN; KÁLMÁN, ZSÓFIA; LAMBRUGHI, MATTEO; LEONARDI, EMANUELA; LONGHI, SONIA; MACEDO-RIBEIRO, SANDRA; MAIANI, EMILIANO; MARCHETTI, JULIA; MARINO-BUSLJE, CRISTINA; MÉSZÁROS, ATTILA; MONZON, ALEXANDER MIGUEL; MINERVINI, GIOVANNI; NADENDLA, SUVARNA; NILSSON, JULIET F; NOVOTNÝ, MARIAN; OUZOUNIS, CHRISTOS A; PALOPOLI, NICOLÁS; PAPALEO, ELENA; PEREIRA, PEDRO JOSÉ BARBOSA; POZZATI, GABRIELE; PROMPONAS, VASILIS J; PUJOLS, JORDI; ROCHA, ALMA CAROLINA SANCHEZ; SALAS, MARTIN; SAWICKI, LUCIANA RODRIGUEZ; SCHAD, EVA; SHENOY, ADITI; SZANISZLÓ, TAMÁS; TSIRIGOS, KONSTANTINOS D; VELJKOVIC
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
NUCLEIC ACIDS RESEARCH; Lugar: Oxford; Año: 2022 vol. 50 p. 480 - 487
ESCOBEDO, NAHUEL; TUNQUE CAHUI, RONALDO ROMARIO; CARUSO, GASTÓN; GARCÍA RÍOS, EMILIO; HIRSH, LAYLA; MONZON, ALEXANDER MIGUEL; PARISI, GUSTAVO; PALOPOLI, NICOLAS
CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure
Bioinformatics (Oxford, England); Lugar: Oxford; Año: 2022 vol. 38 p. 4959 - 4961
GLAVINA, JULIANA; PALOPOLI, NICOLAS; CHEMES, LUCÍA BEATRIZ
Evolution of SLiM-mediated hijack functions in intrinsically disordered viral proteins
ESSAYS IN BIOCHEMISTRY; Año: 2022 vol. 66 p. 945 - 958
PALOPOLI, NICOLAS; MARCHETTI, JULIA; MONZON, ALEXANDER M.; ZEA, DIEGO J.; TOSATTO, SILVIO C.E.; FORNASARI, MARIA S.; PARISI, GUSTAVO
Intrinsically Disordered Protein Ensembles Shape Evolutionary Rates Revealing Conformational Patterns
JOURNAL OF MOLECULAR BIOLOGY; Año: 2021 vol. 433
PARISI, GUSTAVO; PALOPOLI, NICOLAS; TOSATTO, SILVIO C.E.; FORNASARI, MARÍA SILVINA; TOMPA, PETER
"Protein" no longer means what it used to
Current Research in Structural Biology; Lugar: Amsterdam; Año: 2021 vol. 3 p. 146 - 152
GONZÁLEZ BUITRÓN, MARTÍN; TUNQUE CAHUI, RONALDO ROMARIO; GARCÍA RÍOS, EMILIO; HIRSH, LAYLA; PARISI, GUSTAVO; FORNASARI, MARÍA SILVINA; PALOPOLI, NICOLAS
CoDNaS-RNA: a database of conformational diversity in the native state of RNA
BIOINFORMATICS (OXFORD, ENGLAND); Año: 2021
NECCI, MARCO; PIOVESAN, DAMIANO; CAID PREDICTORS; DISPROT CURATORS; TOSATTO, SILVIO C. E.
Critical assessment of protein intrinsic disorder prediction
NATURE METHODS; Año: 2021 vol. 18 p. 472 - 481
PALOPOLI, N; ISERTE, J A; CHEMES, L B; MARINO-BUSLJE, C; PARISI, G; GIBSON, T J; DAVEY, N E
The articles.ELM resource: simplifying access to protein linear motif literature by annotation, text-mining and classification
Database; Lugar: Oxford; Año: 2020 vol. 2020
VELEZ RUEDA, ANA JULIA; PALOPOLI, NICOLAS; ZACARÍAS, MATÍAS; SOMMESE, LEANDRO MATÍAS; PARISI, GUSTAVO
ProtMiscuity: a database of promiscuous proteins
Database : the journal of biological databases and curation; Lugar: Oxford; Año: 2019 vol. 2019
HATOS, ANDRÁS; HAJDU-SOLTÉSZ, BORBÁLA; MONZON, ALEXANDER M.; PALOPOLI, NICOLAS; ÁLVAREZ, LUCÍA; AYKAC-FAS, BURCU; BASSOT, CLAUDIO; BENÍTEZ, GUILLERMO I.; BEVILACQUA, MARTINA; CHASAPI, ANASTASIA; CHEMES, LUCIA; DAVEY, NORMAN E.; DAVIDOVI?, RADOSLAV; DUNKER, A KEITH; ELOFSSON, ARNE; GOBEILL, JULIEN; FOUTEL, NICOLÁS S GONZÁLEZ; SUDHA, GOVINDARAJAN; GUHAROY, MAINAK; HORVATH, TAMAS; IGLESIAS, VALENTIN; KAJAVA, ANDREY V.; KOVACS, ORSOLYA P.; LAMB, JOHN; LAMBRUGHI, MATTEO; LAZAR, TAMAS; LECLERCQ, JEREMY Y.; LEONARDI, EMANUELA; MACEDO-RIBEIRO, SANDRA; MACOSSAY-CASTILLO, MAURICIO; MAIANI, EMILIANO; MANSO, JOSÉ A; MARINO-BUSLJE, CRISTINA; MARTÍNEZ-PÉREZ, ELIZABETH; MÉSZÁROS, BÁLINT; MICETIC, IVAN; MINERVINI, GIOVANNI; MURVAI, NIKOLETTA; NECCI, MARCO; OUZOUNIS, CHRISTOS A.; PAJKOS, MÁTYÁS; PALADIN, LISANNA; PANCSA, RITA; PAPALEO, ELENA; PARISI, GUSTAVO; PASCHE, EMILIE; BARBOSA PEREIRA, PEDRO J.; PROMPONAS, VASILIS J.; PUJOLS, JORDI; QUAGLIA, FEDERICA; RUCH, PATRICK; SALVATORE, MARCO; SCHAD, EVA; SZABO, BEATA; SZANISZLÓ,
DisProt: intrinsic protein disorder annotation in 2020
Nucleic acids research; Lugar: Oxford; Año: 2019 vol. 48 p. 269 - 276
KUMAR, MANJEET; GOUW, MARC; MICHAEL, SUSHAMA; SÁMANO-SÁNCHEZ, HUGO; PANCSA, RITA; GLAVINA, JULIANA; DIAKOGIANNI, ATHINA; VALVERDE, JESÚS ALVARADO; BUKIROVA, DAYANA; ?ALY?EVA, JELENA; PALOPOLI, NICOLAS; DAVEY, NORMAN E.; CHEMES, LUCÍA B; GIBSON, TOBY J.
ELM-the eukaryotic linear motif resource in 2020
Nucleic acids research; Lugar: Oxford; Año: 2019 vol. 48 p. 296 - 306
VELEZ RUEDA, ANA JULIA; BENÍTEZ, GUILLERMO I.; MARCHETTI, JULIA; HASENAHUER, MARCIA ANAHÍ; FORNASARI, MARÍA SILVINA; PALOPOLI, NICOLAS; PARISI, GUSTAVO
Bioinformatics calls the school: Use of smartphones to introduce Python for bioinformatics in high schools
PLOS COMPUTATIONAL BIOLOGY; Año: 2019 vol. 15
PALOPOLI, NICOLÁS; GONZÁLEZ FOUTEL, NICOLÁS S; GIBSON, TOBY J; CHEMES, LUCÍA B
Short linear motif core and flanking regions modulate retinoblastoma protein binding affinity and specificity
PROTEIN ENGINEERING DESIGN & SELECTION; Año: 2018
FIORELLA CRAVERO; LIONEL URAN LANDABURU; NICOLÁS N. MOREYRA; EMILIO FENOY; CARLA L. PADILLA FRANZOTTI; ESTEBAN LANZAROTTI; R. GONZALO PARRA; NICOLÁS PALOPOLI; ALEXANDER MIGUEL MONZON
2nd Argentine Symposium of Young Bioinformatics Researchers (2SAJIB) organized by the ISCB-SC RSG-Argentina
PeerJ Preprints; Lugar: San Diego; Año: 2018 vol. 6
BARCHIESI, JULIETA; VELAZQUEZ, MARIA BELEN; PALOPOLI, NICOLAS; IGLESIAS, ALBERTO A.; GOMEZ-CASATI, DIEGO F.; BALLICORA, MIGUEL ANGEL; BUSI, MARIA VICTORIA
Starch Synthesis in Ostreococcus tauri: The Starch-Binding Domains of Starch Synthase III-B Are Essential for Catalytic Activity
Frontiers in Plant Science; Lugar: Lausanne; Año: 2018 vol. 9
ALEXANDER MIGUEL MONZON; MARCIA A. HASENAHUER; ESTEFANÍA MANCINI; NILSON COIMBRA; FIORELLA CRAVERO; JAVIER CÁCERES-MOLINA; CÉSAR A. RAMÍREZ-SARMIENTO; NICOLAS PALOPOLI; PIETER MEYSMAN; R. GONZALO PARRA
Second ISCB Latin American Student Council Symposium (LA-SCS) 2016
F1000Research; Lugar: Londres; Año: 2017 vol. 6
PALOPOLI NICOLAS; ALEXANDER MIGUEL MONZON; GUSTAVO PARISI; ARIEL CHERNOMORETZ; FERNÁN AGÜERO
A Report On The "International Society For Computational Biology - Latin America (ISCB-LA)" Bioinformatics Conference 2016
EMBnet.journal; Lugar: Uppsala; Año: 2017 vol. 23
GOUW, MARC; MICHAEL, SUSHAMA; SÁMANO-SÁNCHEZ, HUGO; KUMAR, MANJEET; ZEKE, ANDRÁS; LANG, BENJAMIN; BELY, BENOIT; CHEMES, LUCÍA B; DAVEY, NORMAN E; DENG, ZIQI; DIELLA, FRANCESCA; GÜRTH, CLARA-MARIE; HUBER, ANN-KATHRIN; KLEINSORG, STEFAN; SCHLEGEL, LARA S; PALOPOLI, NICOLÁS; ROEY, KIM V; ALTENBERG, BRIGITTE; REMÉNYI, ATTILA; DINKEL, HOLGER; GIBSON, TOBY J.
The eukaryotic linear motif resource - 2018 update
NUCLEIC ACIDS RESEARCH; Año: 2017 vol. 46 p. 428 - 434
SAYANE SHOME; PIETER MEYSMAN; R. GONZALO PARRA; ALEXANDER MIGUEL MONZON; NICOLAS PALOPOLI; BENJAMEN WHITE; FARZANA RAHMAN; MEHEDI HASSAN; ZEYNEP ÖZKESERLI; EFEJIRO ASHANO; V. KEITH HUGHITT; MUHAMMAD UZAIR KHAN; DENIS J. MURPHY
ISCB-Student Council Narratives: Strategical development of the ISCB-Regional Student Groups in 2016
F1000Research; Lugar: Londres; Año: 2016 vol. 5
PALOPOLI, NICOLAS; MONZON, ALEXANDER MIGUEL; PARISI, GUSTAVO; FORNASARI, MARIA SILVINA
Addressing the role of conformational diversity in protein structure prediction
PLOS ONE; Año: 2016 vol. 11
R. GONZALO PARRA; LUCAS A. DEFELIPE; A. BRENDA GUZOVSKY; ALEXANDER M. MONZON; FIORELLA CRAVERO; ESTEFANÍA MANCINI; NICOLÁS MOREYRA; CARLA L. PADILLA FRANZOTTI; MARIA V. REVUELTA; MARIA I. FREIBERGER; NAHUEL N. GONZALEZ; GERMAN A. GONZALEZ; FACUNDO ORTS; NICOLAS STOCCHI; MARCIA A. HASENAHUER; ELIN TEPPA; DIEGO J. ZEA; PALOPOLI, NICOLAS
Highlights of the 1st Argentine Symposium of Young Bioinformatics Researchers (1SAJIB) organized by the ISCB RSG-Argentina
PeerJ Preprints; Lugar: San Diego; Año: 2016 vol. 4
NICOLAS PALOPOLI; KIEREN T. LYTHGOW; RICHARD J. EDWARDS
QSLiMFinder: improved short linear motif prediction using specific query protein data
BIOINFORMATICS (OXFORD, ENGLAND); Lugar: Oxford; Año: 2015 vol. 31 p. 2284 - 2293
RICHARD J. EDWARDS; NICOLAS PALOPOLI
Computational prediction of short linear motifs from protein sequences
METHODS IN MOLECULAR BIOLOGY (CLIFTON, N.J.); Año: 2015 vol. 1268 p. 89 - 141
EMILY OLORIN; KEVIN O'BRIEN; NICOLAS PALOPOLI; ÅSA PÉREZ-BERCOFF; DENIS C. SHIELDS; RICHARD J. EDWARDS
SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks [version 1; referees: 1 approved]
F1000Research; Año: 2015 vol. 4
NICOLAS PALOPOLI; ESTEBAN LANZAROTTI; GUSTAVO PARISI
BeEP Server: using evolutionary information for quality assessment of protein structure models.
NUCLEIC ACIDS RESEARCH; Lugar: Oxford; Año: 2013 vol. 41 p. 398 - 495
EZEQUIEL JURITZ; NICOLAS PALOPOLI; MARIA SILVINA FORNASARI; SEBASTIAN FERNANDEZ ALBERTI; GUSTAVO PARISI
Protein conformational diversity modulates sequence divergence
MOLECULAR BIOLOGY AND EVOLUTION; Lugar: Oxford; Año: 2013 vol. 30 p. 79 - 87
BOLSER DAN M.; CHIBON PIERRE-YVES; PALOPOLI NICOLAS; GONG SUNGSAM; JACOB DANIEL; DOMINGUEZ DEL ANGEL VICTORIA; SWAN DAN; BASSI SEBASTIAN; GONZALEZ VIRGINIA; SURAVAJHALA PRASHANTH; HWANG SEUNGWOO; ROMANO PAOLO; EDWARDS ROB; BISHOP BRYAN; EARGLE JOHN; SHTATLAND TIMUR; PROVART NICHOLAS J.; CLEMENTS DAVE; RENFRO DANIEL P.; BHAK DAEUI; BHAK JONG
MetaBase - the wiki-database of biological databases
NUCLEIC ACIDS RESEARCH; Lugar: Oxford; Año: 2011 vol. 40 p. 1250 - 1254
MARIA V. BUSI; NICOLAS PALOPOLI; HUGO A. VALDEZ; MARIA S. FORNASARI; NAHUEL Z. WAYLLACE; DIEGO F. GOMEZ-CASATI; GUSTAVO PARISI; RODOLFO A. UGALDE
Functional and structural characterization of the catalytic domain of the starch synthase III from Arabidopsis thaliana.
PROTEINS: STRUCTURE, FUNCTION AND GENETICS; Año: 2008 vol. 70 p. 31 - 40
NICOLÁS PALOPOLI; MARÍA VICTORIA BUSI; MARÍA SILVINA FORNASARI; DIEGO GÓMEZ-CASATI; RODOLFO UGALDE; GUSTAVO PARISI
Starch-synthase III family encodes a tandem of three starch-binding domains.
PROTEINS: STRUCTURE, FUNCTION AND GENETICS; Año: 2006 vol. 65 p. 27 - 31