INVESTIGADORES
BARI Sara Elizabeth
congresos y reuniones científicas
Título:
FINE CONTROL OF THE STUDY OF INORGANIC SULFIDES REACTITY ON HEME COMPOUNDS (ALL THAT STINKS IS NOT SULFIDE)
Autor/es:
BIEZA, SILVINA ANDREA; BOUBETA, FERNANDO MARTÍN; FEIS, ALESSANDRO; SMULEVICH, GIULIETTA; ESTRIN, DARÍO A.; BOECHI, LEONARDO; BARI, SARA ELIZABETH
Lugar:
Chascomús
Reunión:
Workshop; Fourth Latin American Meeting on Biological Inorganic Chemistry and FIfth Workshop on Bioinorganic Chemistry; 2014
Resumen:
Fine Control of the Study of Inorganic Sulfides Reactivity on Heme
Compounds
(All that Stinks is not Sulfide)
Silvina
A. Bieza1, Fernando Boubeta1, Alessandro Feis3,
Giulietta Smulevich3, Darío A. Estrín1, Leonardo Boechi2,
and Sara E. Bari1
1Departamento
de Química Inorgánica, Analítica y Química Física/ INQUIMAE-CONICET, 2Instituto
del Cálculo, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos
Aires, Argentina.
3Dipartimento di Chimica ?Ugo Schiff?, Universita' di Firenze, Italy.
sbieza@qi.fcen.uba.ar
INTRODUCTION
The
endogenous production of hydrogen sulfide (H2S) impacts in several
physiological processes1,2. It is known that among its
biological targets are the protein thiols or the heme group of hemeproteins.
Concerning the heme targets, certain ferric hemeproteins have been proved to
bind sulfide species with a very high affinity3,4. There have also been
reported some examples where the ferrous hemeprotein is the product of the reaction
with sulfides5,6. The regulation and mechanisms of these reactions are
unknown, and the analysis is somehow obscured by the purity of the source of
sulfide.7
In an attempt
to study the fundamentals of the chemical reactivity of inorganic sulfide towards
hemeproteins, we selected a minimalist model, the undecapeptide microperoxidase
MP11, which has a heme b (FeIII protoporphyrinate IX) moiety
covalently attached to the peptide, and retains the interaction with the metal
to a proximal histidine. The immediate and inexpensive sources for inorganic
sulfides were Na2S.9H2O or NaHS.2H2O. We
started working with NaHS.2H2O and had some encouraging preliminar
results that soon turned into frustrating, erratic results. Herein, we present
the results of the study of the reactivity of MP11 towards freshly prepared H2S
or the anhydrous Na2S, that allow us to obtain reproducible
experiments, analyzed under the light of UV-Vis and resonance Raman (RR)
spectroscopies. The interpretation of the results required a detailed
computational picture of the role of the aminoacids in the stabilization of the
reaction product. The results presented herein are relevant to the exclusive
role of the proximal histidine in the stabilization of ferric-sulfide complexes,
FeIII-S.
EXPERIMENTAL
METHODS
FeIIINAcMP11
was prepared according to published procedures, from FeIIIMP11
(Sigma-Aldrich). Solutions of [FeIIINAcMP11] ranged from 10-6 to
10-5M, (buffer PO43-, 0.1M), and were
deareated under argon. H2S was prepared from Na2S.9H2O
and H3PO4 using Schlenk equipment, and transferred with gas-tight
syringes. Anhydrous Na2S (Sigma Aldrich), was stored in an inert
glove box. In a typical experiment (25ºC), 100 mL (1 atm) of H2S
(g) were added to a solution of the FeIIINAcMP11 (2.5 mL). Stoichiometric
amounts of the Na2S were dissolved in degassed buffer, and
manipulated under inert atmosphere. UV-Vis spectra were recorded on a HP8453
spectrophotometer. The light source for RR spectroscopy was a Kr+
laser (Coherent, Innova 300C). The back-scattered light from a slowly rotating
NMR tube was collected and focused into a triple spectrometer, equipped with a
liquid N2 cooled CCD detector (Roper Sci., Princeton Instr.). MD
simulations (7 x 200ns) of MP11FeIII(SH) where performed at neutral
pH, TIP3P water as solvation model, using Amber Force
Field, Berendsen Thermosthat, T=300K, and a time step of 1 fs. In order to
avoid sampling issues, also accelerated MD simulations from different MD
snapshots where performed. Na2S. 9H2O, NaHS.2H2O,
1-Methylimidazole, and cysteine were also from Sigma Aldrich.
RESULTS AND DISCUSSION
The absorption spectra recorded after the
addition of gaseous H2S, to a deoxygenated solution of FeIIINAcMP11
at pH 6.8 reveals three bands with maxima at 412 nm (lmax), 536 nm and 568 nm are observed. The calculated ratio H2S:MP11
ca. 100, could not be assessed in the solutions, but excess amounts of the
sulfide could be observed at 230 nm. The final spectrum exhibits the features
of low-spin state FeIII complexes, resembling that of the corresponding
hydroxo complex, only obtained above pH 9,8 or the spectra obtained
after the addition of alkylthiols or L-cysteine.9,10 The anhydrous
Na2S allowed the stoichiometric analysis of the reaction and the
evaluation of the reaction rate. The formation of negligible amounts of the FeIINAcMP11,
was only observed for ratios above 1:25. The use of Na2S. 9H2O
or NaHS.2H2O, as mentioned, yielded erratic results, with enhanced
formation of the FeII form in most of the experiments.
RR spectroscopy was performed on the 412
nm species, and compared to the FeIIINAcMP11. A comparison with the
unbound form reveals the formation of a strong band at 366 cm-1, in
analogy with other low spin FeIII-sulfide adducts, and is
tentatively assigned to the Fe-S stretching mode.11,12 This
frequency seems to characterize the Fe-S(inorganic) stretching mode, as the
binding of cysteine does not show this frequency.
During the
time scale of our simulations, no residues were observed to interact with the coordinated
[(HS-)FeIIIMP11], predicting even less likely interactions
for the real sample, FeIIINacMP11. Accelerated MD simulations, revealed
the same results.13 The
simulations also revealed a dynamic H-bonding interaction between the Nd of the proximal His19 and the carboxyl
group of Thr19. Although H-bonding induces rotation of this proximal histidine,
our calculations show that the imidazole ring maintains a staggered
conformation with respect to the heme. This computational picture highlights
that the stability of complex formed after the addition of H2S or Na2S
to NAcMP11 is attained even in the absence of the assistance of distal
aminoacids.
Selected reactivity tests, as the reaction
with 1-methylimidazole, further support the ferric nature of the complex, and
are currently assisting the determination of kinetic constants.
CONCLUSION
FeIIINAcMP11 provides a model
for the evaluation of proximal effects on the formation of hexacoordinated
complexes, accepting a sulfide species as the sixth ligand devoid of distal
mechanisms of stabilization. The formation of a moderately stable Fe-S complex,
tentatively NAcMP11FeIII(SH-), supports the key role of
the proximal histidine in the binding of inorganic sulfide species to
hemoglobins. A special attention should be placed on the source of inorganic
sulfides, as regular contaminants can lead to erratic and contradicting
results.
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ACKNOWLEDGMENTS
ANPCyT
(PICT 2011-1266) and CONICET are acknowledged for financial support.