Consecutive Queries to Assess Biological Correlation in NMR Metabolomics: Performance of Comprehensive Search of Multiplets over Typical 1D 1 H NMR Database Search

BURDISSO, PAULA; RIQUELME, GABRIEL; CHARRIS-MOLINA, ANDRÉS; HOIJEMBERG, PABLO A.; BURDISSO, PAULA; RIQUELME, GABRIEL; CHARRIS-MOLINA, ANDRÉS; HOIJEMBERG, PABLO A.

JOURNAL OF PROTEOME RESEARCH

AMER CHEMICAL SOC

Año: 2020 vol. 19 p. 2977 - 2988

1535-3893

ABSTRACT: NMR-based metabolomics requires the proper identification of metabolites to extract conclusions from the system under study. Normally, multivariate data analysis is performed on 1D 1H NMR spectra, and the identification of peaks (and then compounds) relevant to the classification is accomplished using database queries as a first step. 1D 1H NMR spectra of complex mixtures often suffer from peak overlap. To overcome this issue, several studies employed the projections of the (tilted and symmetrized) 2D 1H J-resolved (JRES) spectra, p-JRES, which are similar to 1D 1H decoupled spectra. Nonetheless, there are no public databases available that allow searching for chemical shift spectral data for multiplets. We present the Chemical Shift Multiplet Database (CSMDB), built utilizing JRES spectra obtained from the Birmingham Metabolite Library. The CSMDB provides scoring accounting for both matched and unmatched peaks from a query list and the database hits. This input list is generated from a projection of a 2D statistical correlation analysis on the JRES spectra, p-(JRES-STOCSY), being able to compare the multiplets for the matched peaks, in essence the f1 traces from the JRES-STOCSY spectrum and from the database hit. The inspection of the unmatched peaks for the database hit allows the retrieval of peaks in the query list that have a decreased correlation coefficient due to low intensities. The CSMDB is coupled to ?ConQuer ABC?, which permits the assessment of biological correlation by means of consecutive queries with the unmatched peaks in the first and subsequent queries.