INVESTIGADORES
CAVAGNARO pablo Federico
congresos y reuniones científicas
Título:
Carrot chromosomes and linkage groups.
Autor/es:
IOVENE, M.; CAVAGNARO, P. F.; SIMON, P. W.
Reunión:
Conferencia; 34th International Carrot Conference; 2010
Resumen:
The genome of carrot (Daucus carota L.) consists of ~480 Mb/1C organized in 9
chromosome pairs. The importance of carrots in human nutrition is triggering the
development of genomic resources, including carrot linkage maps, a bacterial artificial
chromosome (BAC) clone library and BAC end sequences (Cavagnaro et al., 2008 ). In
contrast to these advances, the carrot genome is poorly characterized at chromosome
level. While several linkage maps based on different types of molecular markers have
been produced, there has been no effort to correlate the linkage groups with specific
chromosomes. Carrot somatic metaphase chromosomes are 24 mm in length, thus
they offer limited resolution for modern cytogenetic tools. On the other hand,
preparation of meiotic chromosomes is technically challenging due to the flower bud
size. In this work, we present our effort to establish a pachytene karyotype of carrot and
to assign carrot linkage groups to pachytene bivalents. Carrot pachytene complements
prepared from carrot line 2566B consisted of four metacentric and five subtelocentric
chromosomes, and were up to ~8 times longer than their mitotic counterpart.
Heterochromatin was mainly confined to the pericentromeric regions of each
chromosome. Several BAC clones selected for genetically mapped DNA markers were
mapped to specific chromosomes and linked markers were physically linked. Using two color FISH, a probe cocktail composed by 11 BACs from eight linkage groups was
sufficient to identify the 9 pachytene bivalents. Our work will be helpful to integrate the
available linkage data with the chromosome morphology.