INVESTIGADORES
POLITIS Gustavo Gabriel
artículos
Título:
bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS)
Autor/es:
SAPFO MALASPINAS, A.; TANGE, O. ; MORENO-MAYAR, J. V.; RASMUSSEN, M.; DE GIORGIO, M.; WANG, Y.; VALDIOSERA, C. E. ; POLITIS, G.; WILLERSLEV, E.; NIELSEN, R.
Revista:
BIOINFORMATICS (OXFORD, ENGLAND)
Editorial:
OXFORD UNIV PRESS
Referencias:
Año: 2014 p. 1 - 2
ISSN:
1367-4803
Resumen:
We present bammds, a practical tool that allows visualization of samples sequenced by 2nd
generation sequencing when compared to a reference panel of
individuals (usually genotypes) using a multidimensional scaling
(MDS) algorithm. Our tool is aimed at determining the
ancestry of unknown samples - typical of ancient DNA (aDNA) data -
particularly when only low amounts of data are
available for those samples.
