IFLP   13074
INSTITUTO DE FISICA LA PLATA
Unidad Ejecutora - UE
artículos
Título:
Clustering gene expression by dynamics: A maximum entropy approach
Autor/es:
L. DIAMBRA
Revista:
PHYSICA A - STATISTICAL AND THEORETICAL PHYSICS
Editorial:
Elsevier
Referencias:
Lugar: Amsterdam; Año: 2007 vol. 387 p. 2187 - 2196
ISSN:
0378-4371
Resumen:
Arrays allow simultaneous measurements of the expression levels of thousands of mRNAs. By mining this data one can identify sets of genes with similar profiles. We show that information theoretic methods are capable of modeling and assessing dissimilarities between the dynamics underlying to the gene expression time series. By recourse of a maximum entropy-basedmethod for building models, we built a distance between two gene expression profiles, which takes into account the dynamic features of the expression. The proposed distance measure can be implemented over a wide variety of clustering algorithms enhancing their usefulness.